Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae.
Identifieur interne : 000926 ( Main/Exploration ); précédent : 000925; suivant : 000927Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae.
Auteurs : Margarita Ros [Espagne] ; Iulia Raut [Roumanie] ; Ana Belén Santisima-Trinidad [Espagne] ; Jose Antonio Pascual [Espagne]Source :
- PloS one [ 1932-6203 ] ; 2017.
Descripteurs français
- KwdFr :
- Bactéries (isolement et purification), Capsicum (croissance et développement), Capsicum (microbiologie), Capsicum (parasitologie), Champignons (isolement et purification), Lutte biologique contre les nuisibles (MeSH), Maladies des plantes (microbiologie), Maladies des plantes (parasitologie), Microbiologie du sol (MeSH), Phytophthora (physiologie), Plant (croissance et développement), Plant (microbiologie), Plant (parasitologie), Rhizosphère (MeSH), Sol (composition chimique), Sol (parasitologie), Trichoderma (physiologie).
- MESH :
- composition chimique : Sol.
- croissance et développement : Capsicum, Plant.
- isolement et purification : Bactéries, Champignons.
- microbiologie : Capsicum, Maladies des plantes, Plant.
- parasitologie : Capsicum, Maladies des plantes, Plant, Sol.
- physiologie : Phytophthora, Trichoderma.
- Lutte biologique contre les nuisibles, Microbiologie du sol, Rhizosphère.
English descriptors
- KwdEn :
- Bacteria (isolation & purification), Capsicum (growth & development), Capsicum (microbiology), Capsicum (parasitology), Fungi (isolation & purification), Pest Control, Biological (MeSH), Phytophthora (physiology), Plant Diseases (microbiology), Plant Diseases (parasitology), Rhizosphere (MeSH), Seedlings (growth & development), Seedlings (microbiology), Seedlings (parasitology), Soil (chemistry), Soil (parasitology), Soil Microbiology (MeSH), Trichoderma (physiology).
- MESH :
- chemical , chemistry : Soil.
- growth & development : Capsicum, Seedlings.
- isolation & purification : Bacteria, Fungi.
- microbiology : Capsicum, Plant Diseases, Seedlings.
- parasitology : Capsicum, Plant Diseases, Seedlings, Soil.
- physiology : Phytophthora, Trichoderma.
- Pest Control, Biological, Rhizosphere, Soil Microbiology.
Abstract
The understanding of the dynamic of soil-borne diseases is related to the microbial composition of the rhizosphere which is the key to progress in the field of biological control. Trichoderma spp. is commonly used as a biological control agent. The use of next generation sequencing approaches and quantitative PCR are two successful approaches to assess the effect of using compost as substrate fortified with two Trichoderma strains (Trichoderma harzianum or Trichoderma asperellum) on bacterial and fungal communities in pepper rhizosphere infected with Phytophthora nicotianae. The results showed changes in the bacterial rhizosphere community not attributed to the Trichoderma strain, but to the pathogen infection, while, fungi were not affected by pathogen infection and depended on the type of substrate. The Trichoderma asperellum fortified compost was the most effective combination against the pathogen. This could indicate that the effect of fortified composts is greater than compost itself and the biocontrol effect should be attributed to the Trichoderma strains rather than the compost microbiota, although some microorganisms could help with the biocontrol effect.
DOI: 10.1371/journal.pone.0174069
PubMed: 28346470
PubMed Central: PMC5367787
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae.</title><author><name sortKey="Ros, Margarita" sort="Ros, Margarita" uniqKey="Ros M" first="Margarita" last="Ros">Margarita Ros</name><affiliation wicri:level="1"><nlm:affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia</wicri:regionArea><wicri:noRegion>Murcia</wicri:noRegion></affiliation></author><author><name sortKey="Raut, Iulia" sort="Raut, Iulia" uniqKey="Raut I" first="Iulia" last="Raut">Iulia Raut</name><affiliation wicri:level="1"><nlm:affiliation>National institute for Research & Development in Chemistry & Petrochemistry - ICECHIM, Biotechnology & Bioanalysis group, Bucharest, Romania.</nlm:affiliation><country xml:lang="fr">Roumanie</country><wicri:regionArea>National institute for Research & Development in Chemistry & Petrochemistry - ICECHIM, Biotechnology & Bioanalysis group, Bucharest</wicri:regionArea><wicri:noRegion>Bucharest</wicri:noRegion></affiliation></author><author><name sortKey="Santisima Trinidad, Ana Belen" sort="Santisima Trinidad, Ana Belen" uniqKey="Santisima Trinidad A" first="Ana Belén" last="Santisima-Trinidad">Ana Belén Santisima-Trinidad</name><affiliation wicri:level="1"><nlm:affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia</wicri:regionArea><wicri:noRegion>Murcia</wicri:noRegion></affiliation></author><author><name sortKey="Pascual, Jose Antonio" sort="Pascual, Jose Antonio" uniqKey="Pascual J" first="Jose Antonio" last="Pascual">Jose Antonio Pascual</name><affiliation wicri:level="1"><nlm:affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia</wicri:regionArea><wicri:noRegion>Murcia</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:28346470</idno><idno type="pmid">28346470</idno><idno type="doi">10.1371/journal.pone.0174069</idno><idno type="pmc">PMC5367787</idno><idno type="wicri:Area/Main/Corpus">000A08</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000A08</idno><idno type="wicri:Area/Main/Curation">000A08</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000A08</idno><idno type="wicri:Area/Main/Exploration">000A08</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae.</title><author><name sortKey="Ros, Margarita" sort="Ros, Margarita" uniqKey="Ros M" first="Margarita" last="Ros">Margarita Ros</name><affiliation wicri:level="1"><nlm:affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia</wicri:regionArea><wicri:noRegion>Murcia</wicri:noRegion></affiliation></author><author><name sortKey="Raut, Iulia" sort="Raut, Iulia" uniqKey="Raut I" first="Iulia" last="Raut">Iulia Raut</name><affiliation wicri:level="1"><nlm:affiliation>National institute for Research & Development in Chemistry & Petrochemistry - ICECHIM, Biotechnology & Bioanalysis group, Bucharest, Romania.</nlm:affiliation><country xml:lang="fr">Roumanie</country><wicri:regionArea>National institute for Research & Development in Chemistry & Petrochemistry - ICECHIM, Biotechnology & Bioanalysis group, Bucharest</wicri:regionArea><wicri:noRegion>Bucharest</wicri:noRegion></affiliation></author><author><name sortKey="Santisima Trinidad, Ana Belen" sort="Santisima Trinidad, Ana Belen" uniqKey="Santisima Trinidad A" first="Ana Belén" last="Santisima-Trinidad">Ana Belén Santisima-Trinidad</name><affiliation wicri:level="1"><nlm:affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia</wicri:regionArea><wicri:noRegion>Murcia</wicri:noRegion></affiliation></author><author><name sortKey="Pascual, Jose Antonio" sort="Pascual, Jose Antonio" uniqKey="Pascual J" first="Jose Antonio" last="Pascual">Jose Antonio Pascual</name><affiliation wicri:level="1"><nlm:affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia</wicri:regionArea><wicri:noRegion>Murcia</wicri:noRegion></affiliation></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Bacteria (isolation & purification)</term><term>Capsicum (growth & development)</term><term>Capsicum (microbiology)</term><term>Capsicum (parasitology)</term><term>Fungi (isolation & purification)</term><term>Pest Control, Biological (MeSH)</term><term>Phytophthora (physiology)</term><term>Plant Diseases (microbiology)</term><term>Plant Diseases (parasitology)</term><term>Rhizosphere (MeSH)</term><term>Seedlings (growth & development)</term><term>Seedlings (microbiology)</term><term>Seedlings (parasitology)</term><term>Soil (chemistry)</term><term>Soil (parasitology)</term><term>Soil Microbiology (MeSH)</term><term>Trichoderma (physiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Bactéries (isolement et purification)</term><term>Capsicum (croissance et développement)</term><term>Capsicum (microbiologie)</term><term>Capsicum (parasitologie)</term><term>Champignons (isolement et purification)</term><term>Lutte biologique contre les nuisibles (MeSH)</term><term>Maladies des plantes (microbiologie)</term><term>Maladies des plantes (parasitologie)</term><term>Microbiologie du sol (MeSH)</term><term>Phytophthora (physiologie)</term><term>Plant (croissance et développement)</term><term>Plant (microbiologie)</term><term>Plant (parasitologie)</term><term>Rhizosphère (MeSH)</term><term>Sol (composition chimique)</term><term>Sol (parasitologie)</term><term>Trichoderma (physiologie)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Soil</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Sol</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Capsicum</term><term>Plant</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Capsicum</term><term>Seedlings</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Bacteria</term><term>Fungi</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Bactéries</term><term>Champignons</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Capsicum</term><term>Maladies des plantes</term><term>Plant</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Capsicum</term><term>Plant Diseases</term><term>Seedlings</term></keywords><keywords scheme="MESH" qualifier="parasitologie" xml:lang="fr"><term>Capsicum</term><term>Maladies des plantes</term><term>Plant</term><term>Sol</term></keywords><keywords scheme="MESH" qualifier="parasitology" xml:lang="en"><term>Capsicum</term><term>Plant Diseases</term><term>Seedlings</term><term>Soil</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Phytophthora</term><term>Trichoderma</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Phytophthora</term><term>Trichoderma</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Pest Control, Biological</term><term>Rhizosphere</term><term>Soil Microbiology</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Lutte biologique contre les nuisibles</term><term>Microbiologie du sol</term><term>Rhizosphère</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The understanding of the dynamic of soil-borne diseases is related to the microbial composition of the rhizosphere which is the key to progress in the field of biological control. Trichoderma spp. is commonly used as a biological control agent. The use of next generation sequencing approaches and quantitative PCR are two successful approaches to assess the effect of using compost as substrate fortified with two Trichoderma strains (Trichoderma harzianum or Trichoderma asperellum) on bacterial and fungal communities in pepper rhizosphere infected with Phytophthora nicotianae. The results showed changes in the bacterial rhizosphere community not attributed to the Trichoderma strain, but to the pathogen infection, while, fungi were not affected by pathogen infection and depended on the type of substrate. The Trichoderma asperellum fortified compost was the most effective combination against the pathogen. This could indicate that the effect of fortified composts is greater than compost itself and the biocontrol effect should be attributed to the Trichoderma strains rather than the compost microbiota, although some microorganisms could help with the biocontrol effect.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28346470</PMID><DateCompleted><Year>2017</Year><Month>09</Month><Day>01</Day></DateCompleted><DateRevised><Year>2019</Year><Month>02</Month><Day>08</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>12</Volume><Issue>3</Issue><PubDate><Year>2017</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS One</ISOAbbreviation></Journal><ArticleTitle>Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae.</ArticleTitle><Pagination><MedlinePgn>e0174069</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0174069</ELocationID><Abstract><AbstractText>The understanding of the dynamic of soil-borne diseases is related to the microbial composition of the rhizosphere which is the key to progress in the field of biological control. Trichoderma spp. is commonly used as a biological control agent. The use of next generation sequencing approaches and quantitative PCR are two successful approaches to assess the effect of using compost as substrate fortified with two Trichoderma strains (Trichoderma harzianum or Trichoderma asperellum) on bacterial and fungal communities in pepper rhizosphere infected with Phytophthora nicotianae. The results showed changes in the bacterial rhizosphere community not attributed to the Trichoderma strain, but to the pathogen infection, while, fungi were not affected by pathogen infection and depended on the type of substrate. The Trichoderma asperellum fortified compost was the most effective combination against the pathogen. This could indicate that the effect of fortified composts is greater than compost itself and the biocontrol effect should be attributed to the Trichoderma strains rather than the compost microbiota, although some microorganisms could help with the biocontrol effect.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ros</LastName><ForeName>Margarita</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Raut</LastName><ForeName>Iulia</ForeName><Initials>I</Initials><AffiliationInfo><Affiliation>National institute for Research & Development in Chemistry & Petrochemistry - ICECHIM, Biotechnology & Bioanalysis group, Bucharest, Romania.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Santisima-Trinidad</LastName><ForeName>Ana Belén</ForeName><Initials>AB</Initials><AffiliationInfo><Affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Pascual</LastName><ForeName>Jose Antonio</ForeName><Initials>JA</Initials><AffiliationInfo><Affiliation>Department of Soil and Water Conservation and Organic Waste Management, Centro de Edafología y Biología Aplicada del Segura, CSIC, Murcia, Spain.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>03</Month><Day>27</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>PLoS One</MedlineTA><NlmUniqueID>101285081</NlmUniqueID><ISSNLinking>1932-6203</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D001419" MajorTopicYN="N">Bacteria</DescriptorName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002212" MajorTopicYN="N">Capsicum</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName><QualifierName UI="Q000469" MajorTopicYN="Y">parasitology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D005658" MajorTopicYN="N">Fungi</DescriptorName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010572" MajorTopicYN="N">Pest Control, Biological</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName><QualifierName UI="Q000469" MajorTopicYN="Y">parasitology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D058441" MajorTopicYN="Y">Rhizosphere</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D036226" MajorTopicYN="N">Seedlings</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName><QualifierName UI="Q000469" MajorTopicYN="Y">parasitology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="N">Soil</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName><QualifierName UI="Q000469" MajorTopicYN="N">parasitology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014242" MajorTopicYN="N">Trichoderma</DescriptorName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>11</Month><Day>18</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>03</Month><Day>02</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>3</Month><Day>28</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>3</Month><Day>28</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>9</Month><Day>2</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28346470</ArticleId><ArticleId IdType="doi">10.1371/journal.pone.0174069</ArticleId><ArticleId IdType="pii">PONE-D-16-45880</ArticleId><ArticleId IdType="pmc">PMC5367787</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>J Appl Microbiol. 2005;98(4):845-54</Citation><ArticleIdList><ArticleId IdType="pubmed">15752330</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2006 Feb;96(2):186-9</Citation><ArticleIdList><ArticleId IdType="pubmed">18943923</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioresour Technol. 2013 Apr;133:573-80</Citation><ArticleIdList><ArticleId IdType="pubmed">23475177</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Methods. 2013 Oct;10(10):996-8</Citation><ArticleIdList><ArticleId IdType="pubmed">23955772</ArticleId></ArticleIdList></Reference><Reference><Citation>J Sci Food Agric. 2015 May;95(7):1482-90</Citation><ArticleIdList><ArticleId IdType="pubmed">25074864</ArticleId></ArticleIdList></Reference><Reference><Citation>Pestic Biochem Physiol. 2013 Sep;107(1):112-9</Citation><ArticleIdList><ArticleId IdType="pubmed">25149244</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2013 Oct;103(10):1001-11</Citation><ArticleIdList><ArticleId IdType="pubmed">24020904</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2003 Jan;69(1):452-60</Citation><ArticleIdList><ArticleId IdType="pubmed">12514027</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Microbiol. 2007 Nov 30;7:108</Citation><ArticleIdList><ArticleId IdType="pubmed">18047683</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013 May 21;8(5):e63994</Citation><ArticleIdList><ArticleId IdType="pubmed">23700443</ArticleId></ArticleIdList></Reference><Reference><Citation>ISME J. 2009 Oct;3(10):1127-38</Citation><ArticleIdList><ArticleId IdType="pubmed">19554036</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2012 Aug;78(16):5942-4</Citation><ArticleIdList><ArticleId IdType="pubmed">22685147</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(2):e31806</Citation><ArticleIdList><ArticleId IdType="pubmed">22359632</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2006 Feb;96(2):181-5</Citation><ArticleIdList><ArticleId IdType="pubmed">18943922</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioresour Technol. 2010 May;101(10):3718-23</Citation><ArticleIdList><ArticleId IdType="pubmed">20096572</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2011 May 27;332(6033):1097-100</Citation><ArticleIdList><ArticleId IdType="pubmed">21551032</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Ecol. 2014 May;88(2):296-308</Citation><ArticleIdList><ArticleId IdType="pubmed">24490666</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2009 Oct 09;4(10):e7401</Citation><ArticleIdList><ArticleId IdType="pubmed">19816594</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Microbiol. 2010 Mar 29;10:94</Citation><ArticleIdList><ArticleId IdType="pubmed">20350306</ArticleId></ArticleIdList></Reference><Reference><Citation>Microbiology. 2012 Jan;158(Pt 1):17-25</Citation><ArticleIdList><ArticleId IdType="pubmed">21998166</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2011;6(6):e21280</Citation><ArticleIdList><ArticleId IdType="pubmed">21701585</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013 Nov 21;8(11):e79512</Citation><ArticleIdList><ArticleId IdType="pubmed">24278144</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Methods. 2010 May;7(5):335-6</Citation><ArticleIdList><ArticleId IdType="pubmed">20383131</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Ecol. 2008 Jul;65(1):133-44</Citation><ArticleIdList><ArticleId IdType="pubmed">18537836</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2001 Jan;67(1):411-9</Citation><ArticleIdList><ArticleId IdType="pubmed">11133473</ArticleId></ArticleIdList></Reference><Reference><Citation>J Environ Manage. 2012 Mar;95 Suppl:S280-4</Citation><ArticleIdList><ArticleId IdType="pubmed">21190787</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2014 Jun 23;9(6):e100709</Citation><ArticleIdList><ArticleId IdType="pubmed">24955843</ArticleId></ArticleIdList></Reference><Reference><Citation>J Microbiol Methods. 2003 Nov;55(2):371-82</Citation><ArticleIdList><ArticleId IdType="pubmed">14529958</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioresour Technol. 2010 Apr;101(8):2888-91</Citation><ArticleIdList><ArticleId IdType="pubmed">19897358</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2004 Jan;134(1):307-19</Citation><ArticleIdList><ArticleId IdType="pubmed">14684838</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Microbiol Biotechnol. 2009 Aug;84(1):11-8</Citation><ArticleIdList><ArticleId IdType="pubmed">19568745</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2004 Oct;94(10):1094-101</Citation><ArticleIdList><ArticleId IdType="pubmed">18943798</ArticleId></ArticleIdList></Reference><Reference><Citation>J Sci Food Agric. 2015 Apr;95(6):1243-51</Citation><ArticleIdList><ArticleId IdType="pubmed">25043929</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2010 Oct 1;26(19):2460-1</Citation><ArticleIdList><ArticleId IdType="pubmed">20709691</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Ecol. 2005 Jul 1;53(2):245-53</Citation><ArticleIdList><ArticleId IdType="pubmed">16329944</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2016 Aug 04;11(8):e0158048</Citation><ArticleIdList><ArticleId IdType="pubmed">27490955</ArticleId></ArticleIdList></Reference><Reference><Citation>J Plant Res. 2011 Jul;124(4):489-99</Citation><ArticleIdList><ArticleId IdType="pubmed">21380629</ArticleId></ArticleIdList></Reference><Reference><Citation>J Antibiot (Tokyo). 1972 Feb;25(2):109-15</Citation><ArticleIdList><ArticleId IdType="pubmed">5034807</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Espagne</li><li>Roumanie</li></country></list><tree><country name="Espagne"><noRegion><name sortKey="Ros, Margarita" sort="Ros, Margarita" uniqKey="Ros M" first="Margarita" last="Ros">Margarita Ros</name></noRegion><name sortKey="Pascual, Jose Antonio" sort="Pascual, Jose Antonio" uniqKey="Pascual J" first="Jose Antonio" last="Pascual">Jose Antonio Pascual</name><name sortKey="Santisima Trinidad, Ana Belen" sort="Santisima Trinidad, Ana Belen" uniqKey="Santisima Trinidad A" first="Ana Belén" last="Santisima-Trinidad">Ana Belén Santisima-Trinidad</name></country><country name="Roumanie"><noRegion><name sortKey="Raut, Iulia" sort="Raut, Iulia" uniqKey="Raut I" first="Iulia" last="Raut">Iulia Raut</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PhytophthoraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000926 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000926 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PhytophthoraV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:28346470
|texte= Relationship of microbial communities and suppressiveness of Trichoderma fortified composts for pepper seedlings infected by Phytophthora nicotianae.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:28346470" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PhytophthoraV1
| This area was generated with Dilib version V0.6.38. |  |